last update: 23/06/2021
- Yuqin Sun, Jing Sun, Athena A Nghiem, Benjamin C Bostick, Tyler Ellis, Long Han, Zengyi Li, Songlin Liu, Shuangbao Han, Miao Zhang, Yu Xia, Yan Zheng*. 2020. Reduction of iron (hydro) oxide-bound arsenate: Evidence from high depth resolution sampling of a reducing aquifer in Yinchuan Plain, China. Journal of Hazardous Materials. 124615
- Lei Liu; Yulin Wang; You Che; Yiqiang Chen; Yu Xia; Ruibang Luo; Suk Hang Cheng; Chunmiao Zheng; Tong Zhang*. 2020. High-Quality Bacterial Genomes of a Partial-Nitritation/Anammox System by an Iterative Hybrid Assembly Method. Microbiome.8:155
- Chunxiao Wang, Yubo Wang, Yulin Wang, Kin-kuen Cheung, Feng Ju, Yu Xia, Tong Zhang*. 2020. Genome-centric microbiome analysis reveals solid retention time (SRT)-shaped species interactions and niche differentiation in food waste and sludge co-digesters. Water Research. 115858.
- Chenyuan Dang, Yu Xia, Maosheng Zheng, Tang Liu, Wen Liu, Qian Chen, Jinren Ni*. 2020. Metagenomic insights into the profile of antibiotic resistomes in a large drinking water reservoir. Environment International. 136: 105449.
- You Che, Yu Xia, Lei Liu, An-Dong Li, Yu Yang, Tong Zhang*. 2019. Mobile antibiotic resistome in wastewater treatment plants revealed by Nanopore metagenomic sequencing. Microbiome. 7:44.
- Yu Deng, Yulin Wang, Yu Xia, An Ni Zhang, Yuehao Zhao, Tong Zhang*. 2019. Genomic resolution of bacterial populations in saccharin and cyclamate degradation. Science of The Total Environment. 357-366.
- Yu Xia†, Yang Chang†, Tong Zhang*. 2018. Microbial effects of part-stream low-frequency ultrasonic pretreatment on sludge anaerobic digestion as revealed by high-throughput sequencing-based metagenomics and metatranscriptomics. Biotechnology for Biofuels. 11:47. (Impact factor 2017: 5.203).
- Liping Ma, Bing Li, Xiao-Tao Jiang, Yu-lin Wang, Yu Xia, An-Dong Li, Tong Zhang*. 2018. Catalogue of Antibiotic Resistome and Host-tracking in Drinking Water Deciphered by Large Scale Survey. Microbiome. 5:154.
- Yu Xia†, An-Dong Li†, Yu Deng, Xiao-Tao Jiang, Li-Guan Li and Tong Zhang*. 2017. MinION nanopore sequencing enables correlation between resistome phenotype and genotype of coliform bacteria in municipal sewage. Frontiers in Microbiology. 8:2105. (Impact factor 2017: 4.076).
- Chao Yang, Ying Yang, You Che, Yu Xia, Liguan Li, Wenguang Xiong, Tong Zhang*. 2017. Bioprospecting for β-lactam resistance genes using a metagenomics-guided strategy. Applied Microbiology and Biotechnology. 101(15):6253-6260.
- Yulin Wang, Liping Ma, Yanping Mao, Xiaotao Jiang, Yu Xia, Ke Yu, Bing Li, Tong Zhang*. 2017. Comammox in drinking water systems. Water Research. 116:332-341.
- Jian-Qiang Su†, Yu Xia† (Co-first author), Huai-Ying Yao, Ya-Ying Li, Xin-Li An, Brajesh K. Singh, Tong Zhang*, Yong-Guan Zhu*. 2016. Metagenomic assembly unravel microbial response to redox fluctuation in acid sulfate soil. Soil Biology & Biochemistry. 105:244-252. (Impact factor 2017: 4.857).
- Li-Guan Li†, Yu Xia† (Co-first author), Tong Zhang*. 2016. Co-occurrence of antibiotic and metal resistance genes revealed in complete genome collection. The ISME Journal. 11(3):651-662. (Impact factor 2017: 9.664).
- Chao Yang†, Yu Xia† (Co-first author), Hong Qu, An-Dong Li, Ruihua Liu, Yubo Wang, Tong Zhang*. 2016. Discovery of new cellulases from the metagenome by a metagenomics-guided strategy. Biotechnology for Biofuels. 9: 138 (Impact factor 2017: 5.203).
- Yu Xia, Yubo Wang, Yi Wang, Francis Y.L. Chin, Tong Zhang*. 2016. Cellular adhesiveness and cellulolytic capacity in Anaerolineae revealed by omics-based genome interpretation. Biotechnology for Biofuels. 9:111. (Impact factor 2017: 5.203).
- Liping Ma, Yu Xia, Bing Li, Ying Yang, Liguan Li, James Tiedje, Tong Zhang*. 2016. Metagenomic assembly reveals hosts of antibiotic resistance genes and the shared resistome in pig, chicken and human feces. Environmental Science & Technology. 50:420-427.
- Feng Ju, Yubo Wang, Frankie T.K. Lau, W.C. Fung, Danping Huang, Yu Xia, Tong Zhang*. 2016. Anaerobic digestion of chemically enhanced primary treatment (CEPT) sludge and the microbial community structure. Applied Microbiology and Biotechnology. 100:8975-8982.
- Yu Xia, Francis Y.L. Chin, Yuanqing Chao, Tong Zhang*. 2015. Phylogeny-structured carbohydrate metabolism across microbiomes collected from different units of wastewater treatment process Biotechnology for Biofuels. 8:1-12. (Impact factor 2017: 5.203).
- Yu Xia, Yubo Wang, Herbert H.P. Fang, Tao Jin, Huanzhi Zhong, Tong Zhang*. 2015. Thermophilic microbial cellulose decomposition and methanogenesis pathways recharacterized by metatranscriptomic and metagenomic analysis. Scientific Reports. 4: 6708. (Impact factor 2017: 4.259).
- Yubo Wang, Yu Xia, Feng Ju, Tong Zhang*. 2015. Metagenome approaches revealed a biological prospect for improvement on mesophilic cellulose degradation. Applied Microbiology and Biotechnology. 99:10871-10879.
- Yanping Mao, Yu Xia, Zhiping Wang, Tong Zhang*. 2014. Reconstructing a Thauera genome from a hydrogenotrophic-denitrifying consortium using metagenomic sequence data. Applied Microbiology and Biotechnology. 98: 6885-6895.
- Feng Ju, Yu Xia, Feng Guo, Zhiping Wang, and Tong Zhang*. 2014. Taxonomic relatedness shapes bacterial assembly in activated sludge of globally distributed wastewater treatment plants. Environmental Microbiology. 16: 2421-2432.
- Yanping Mao, Ke Yu, Yu Xia, Yuanqing Chao, Tong Zhang*. 2014. Genome reconstruction and gene expression of 'Candidatus Accumulibacter phosphatis' Clade IB performing biological phosphorus removal. Environmental Science & Technology. 48:10363-71.
- Zhiping Wang, Feng Guo, Yanping Mao, Yu Xia, Tong Zhang*. 2014. Metabolic characteristics of a glycogen accumulating organism in Defluviicoccus cluster II revealed by comparative genomics. Microbial Ecology 68:716-728.
- Ying Yang, Ke Yu, Yu Xia, Frankie T.K. Lau, Daniel T.W. Tang, Wingcheong Fung, Herbert H.P. Fang, Tong Zhang*. 2014. Metagenomic analysis of sludge from full-scale anaerobic digesters operated in municipal wastewater treatment plants. Applied Microbiology and Biotechnology 98(12): 1-10.
- Yu Xia, Herbert H.P. Fang, and Tong Zhang*. 2013. Recent Studies on Thermophilic anaerobic bioconversion of lignocellulosic biomass. RSC Advances. 3:15528-15542. (Impact factor 2017: 3.108).
- Yu Xia, Feng Ju, Herbert H. P. Fang, and Tong Zhang*. 2013. Mining of novel thermo-stable cellulolytic genes from a thermophilic cellulose-degrading consortium by metagenomics. PLoS ONE. 8: e53779. (Impact factor 2017: 2.806).
- Yanping Mao, Yu Xia, Tong Zhang*. 2013. Characterization of Thauera-dominated hydrogen-oxidizing autotrophic denitrifying microbial communities by using high-throughput sequencing. Bioresource Technology. 128:703-710.
- Feng Ju, Feng Guo, Lin Ye, Yu Xia, and Tong Zhang*. 2013. Metagenomic analysis on seasonal microbial variations of activated sludge from a full-Scale wastewater treatment plant over 4 years. Environmental Microbiology Reports. 5(5):80-89.
- Yu Xia, Lin Cai, Tong Zhang*, and Herbert H.P. Fang. 2012. Effects of substrate loading and co-substrates on thermophilic anaerobic conversion of microcrystalline cellulose and microbial communities revealed using high-throughput sequencing. International Journal of Hydrogen Energy. 37: 13652–13659. (Impact factor 2017: 3.582).